Algorithms And Data Structures For External Memory

Describes several useful paradigms for the design and implementation of efficient external memory (EM) algorithms and data structures. The problem domains considered include sorting, permuting, FFT, scientific computing, computational geometry, graphs, databases, geographic information systems, and text and string processing.

Introduction -- Array-based lists -- Linked lists -- Skiplists -- Hash tables -- Binary trees -- Random binary search trees -- Scapegoat trees -- Red-black trees -- Heaps -- Sorting algorithms -- Graphs -- Data structures for integers -- External memory searching.

Algorithms that have to process large data sets have to take into account that the cost of memory access depends on where the data is stored. Traditional algorithm design is based on the von Neumann model where accesses to memory have uniform cost. Actual machines increasingly deviate from this model: while waiting for memory access, nowadays, microprocessors can in principle execute 1000 additions of registers; for hard disk access this factor can reach six orders of magnitude. The 16 coherent chapters in this monograph-like tutorial book introduce and survey algorithmic techniques used to achieve high performance on memory hierarchies; emphasis is placed on methods interesting from a theoretical as well as important from a practical point of view.

Massive modern datasets make traditional data structures and algorithms grind to a halt. This fun and practical guide introduces cutting-edge techniques that can reliably handle even the largest distributed datasets. In Algorithms and Data Structures for Massive Datasets you will learn: Probabilistic sketching data structures for practical problems Choosing the right database engine for your application Evaluating and designing efficient on-disk data structures and algorithms Understanding the algorithmic trade-offs involved in massive-scale systems Deriving basic statistics from streaming data Correctly sampling streaming data Computing percentiles with limited space resources Algorithms and Data Structures for Massive Datasets reveals a toolbox of new methods that are perfect for handling modern big data applications. You’ll explore the novel data structures and algorithms that underpin Google, Facebook, and other enterprise applications that work with truly massive amounts of data. These effective techniques can be applied to any discipline, from finance to text analysis. Graphics, illustrations, and hands-on industry examples make complex ideas practical to implement in your projects—and there’s no mathematical proofs to puzzle over. Work through this one-of-a-kind guide, and you’ll find the sweet spot of saving space without sacrificing your data’s accuracy. About the technology Standard algorithms and data structures may become slow—or fail altogether—when applied to large distributed datasets. Choosing algorithms designed for big data saves time, increases accuracy, and reduces processing cost. This unique book distills cutting-edge research papers into practical techniques for sketching, streaming, and organizing massive datasets on-disk and in the cloud. About the book Algorithms and Data Structures for Massive Datasets introduces processing and analytics techniques for large distributed data. Packed with industry stories and entertaining illustrations, this friendly guide makes even complex concepts easy to understand. You’ll explore real-world examples as you learn to map powerful algorithms like Bloom filters, Count-min sketch, HyperLogLog, and LSM-trees to your own use cases. What's inside Probabilistic sketching data structures Choosing the right database engine Designing efficient on-disk data structures and algorithms Algorithmic tradeoffs in massive-scale systems Computing percentiles with limited space resources About the reader Examples in Python, R, and pseudocode. About the author Dzejla Medjedovic earned her PhD in the Applied Algorithms Lab at Stony Brook University, New York. Emin Tahirovic earned his PhD in biostatistics from University of Pennsylvania. Illustrator Ines Dedovic earned her PhD at the Institute for Imaging and Computer Vision at RWTH Aachen University, Germany. Table of Contents 1 Introduction PART 1 HASH-BASED SKETCHES 2 Review of hash tables and modern hashing 3 Approximate membership: Bloom and quotient filters 4 Frequency estimation and count-min sketch 5 Cardinality estimation and HyperLogLog PART 2 REAL-TIME ANALYTICS 6 Streaming data: Bringing everything together 7 Sampling from data streams 8 Approximate quantiles on data streams PART 3 DATA STRUCTURES FOR DATABASES AND EXTERNAL MEMORY ALGORITHMS 9 Introducing the external memory model 10 Data structures for databases: B-trees, Bε-trees, and LSM-trees 11 External memory sorting

The papers in this volume were presented at the Sixth Workshop on Algorithms and Data Structures (WADS '99). The workshop took place August 11 - 14, 1999, in Vancouver, Canada. The workshop alternates with the Scandinavian Workshop on Algorithms Theory (SWAT), continuing the tradition of SWAT and WADS starting with SWAT'88 and WADS'89. In response to the program committee's call for papers, 71 papers were submitted. From these submissions, the program committee selected 32 papers for presentation at the workshop. In addition to these submitted papers, the program committee invited the following researchers to give plenary lectures at the workshop: C. Leiserson, N. Magnenat-Thalmann, M. Snir, U. Vazarani, and 1. Vitter. On behalf of the program committee, we would like to express our appreciation to the six plenary lecturers who accepted our invitation to speak, to all the authors who submitted papers to W ADS'99, and to the Pacific Institute for Mathematical Sciences for their sponsorship. Finally, we would like to express our gratitude to all the people who reviewed papers at the request of the program committee. August 1999 F. Dehne A. Gupta J.-R. Sack R. Tamassia VI Conference Chair: A. Gupta Program Committee Chairs: F. Dehne, A. Gupta, J.-R. Sack, R. Tamassia Program Committee: A. Andersson, A. Apostolico, G. Ausiello, G. Bilardi, K. Clarkson, R. Cleve, M. Cosnard, L. Devroye, P. Dymond, M. Farach-Colton, P. Fraigniaud, M. Goodrich, A.

The algorithms involve using techniques from computer science and mathematics to solve combinatorial problems whose associated data require the use of a hierarchy of storage devices. The 15 papers discuss such topics as synopsis data structures for massive data sets, maximum clique problems in very large graphs, concrete software libraries, computing on data streams, efficient cross-trees for external memory, efficient schemes for distributing data on parallel memory systems, and external memory techniques for iso-surface extraction in scientific visualization. Annotation copyrighted by Book News, Inc., Portland, OR.

This book constitutes the refereed proceedings of the Third International Workshop on Algorithm Engineering, WAE'99, held in London, UK in July 1999. The 24 revised full papers presented were carefully reviewed and selected from a total of 46 submissions. The papers present original research results in all aspects of algorithm engineering including implementation, experimental testing, fine-tuning of discrete algorithms, development of repositories of software, methodological issues such as standards for empirical research on algorithms and data structures, and issues in the process of converting user requirements into efficient algorithmic solutions and implementations.

This practical text contains fairly "traditional" coverage of data structures with a clear and complete use of algorithm analysis, and some emphasis on file processing techniques as relevant to modern programmers. It fully integrates OO programming with these topics, as part of the detailed presentation of OO programming itself.Chapter topics include lists, stacks, and queues; binary and general trees; graphs; file processing and external sorting; searching; indexing; and limits to computation.For programmers who need a good reference on data structures.