Beyond Cladistics

"This multifarious volume does a splendid job of reflecting the breadth and depth of fundamental questions about the methods of systematics and biogeography, from the practical applications of conservation biology to issues of wide interest to evolutionary biologists."--Dr. Norman I. Platnick, American Museum of Natural History "A fun and informative volume that everyone interested in the subject will enjoy. This book is full of important discussions on Botany, Cladistics, and Biogeography."--Vicki Funk, National Museum of Natural History, Smithsonian Institution "The Branching Of A Paradigm is the intriguing theme of this volume on the myriad of ways cladistics has impacted modern biology. Surprises from floristics to recent thoughts on epistemology await the reader."--Dennis Stevenson, New York Botanical Garden

This new edition of a foundational text presents a contemporary review of cladistics, as applied to biological classification. It provides a comprehensive account of the past fifty years of discussion on the relationship between classification, phylogeny and evolution. It covers cladistics in the era of molecular data, detailing new advances and ideas that have emerged over the last twenty-five years. Written in an accessible style by internationally renowned authors in the field, readers are straightforwardly guided through fundamental principles and terminology. Simple worked examples and easy-to-understand diagrams also help readers navigate complex problems that have perplexed scientists for centuries. This practical guide is an essential addition for advanced undergraduates, postgraduates and researchers in taxonomy, systematics, comparative biology, evolutionary biology and molecular biology.

The Paleobiological Revolution chronicles the incredible ascendance of the once-maligned science of paleontology to the vanguard of a field. With the establishment of the modern synthesis in the 1940s and the pioneering work of George Gaylord Simpson, Ernst Mayr, and Theodosius Dobzhansky, as well as the subsequent efforts of Stephen Jay Gould, David Raup, and James Valentine, paleontology became embedded in biology and emerged as paleobiology, a first-rate discipline central to evolutionary studies. Pairing contributions from some of the leading actors of the transformation with overviews from historians and philosophers of science, the essays here capture the excitement of the seismic changes in the discipline. In so doing, David Sepkoski and Michael Ruse harness the energy of the past to call for further study of the conceptual development of modern paleobiology.

Species Problems and Beyond offers a collection of up-to-date essays discussing from an interdisciplinary perspective the many ramifications of the ‘Species Problem.’ The authors represent experts in the philosophy of biology, in species-level evolutionary investigations, and in biodiversity studies and conservation. Some of the topics addressed concern the context sensitivity of the term ‘species’; species as individuals, processes, natural kinds, or as ‘operative concepts’; species delimitation in the age of Big (genomic) Data; and taxonomic inflation and its consequences for conservation strategies. The carefully edited volume will be an invaluable resource for philosophers of biology and evolutionary biologists alike. – Olivier Rieppel, Rowe Family Curator of Evolutionary Biology, Negaunee Integrative Research Center, Field Museum, USA Species, or ‘the Species Problem’, is a topic in science, in the philosophy of science, and in general philosophy. In fact, it encompasses many aspects of the same problem, and these are dealt with in this volume. Species are often thought of as fundamental units of biological matter to be used in ecology, conservation, classification, and biodiversity. The chapters in this book present opposing views on the current philosophical and conceptual issues of the Species Problem in biology. Divided into four sections, Concepts and Theories, Practice and Methods, Ranks and Trees and Names, and Metaphysics and Epistemologies, the book is authored by biologists, philosophers, and historians, many leaders in their fields. Topics include ontology of species, definitions of both species category and units, species rank, speciation issues, nomenclature, ecology, and species conservation. Species Problems and Beyond aims to clarify the contemporary issues of the Species Problem. It is ideal for use in upper-level seminars and courses in Evolutionary Biology, Philosophy of Science, Philosophy of Biology, Systematics and Taxonomy, and Phylogenetics/Cladistics, and for any scholar in these fields.

Systematics underpins all of biology. Cladistics is a method of systematic classification that aims to reconstruct genealogies based on common ancestry, thus revealing the phylogenetic relationships between taxa. Its applications vary from linguistic analysis to the study of conservation and biodiversity, and it has become a method of choice for comparative studies in all fields of biology. For all students interested in the systematic relationships among organisms, this book provides an integrated, state-of-the-art account of the techniques and methods of modern cladistics, and how to put them into practice.

Recent and ongoing debates in biology and the philosophy of biology reveal a widespread dissatisfaction with traditional explanatory frameworks. There are also problems with the current definitions or circumscriptions of key concepts such as gene, species, and homology, and even of whole disciplinary fields within the life sciences, e.g. developmental biology. These contrasting views are arguably a symptom of the need to revisit traditional, unchallenged partitions between the specialist disciplines within the life sciences. In the diversity of topics addressed and approaches to move beyond the current disciplinary organization, the five essays in this volume will hopefully stimulate further exploration towards an improved articulation of life sciences.

This book documents Willi Hennig's founding of phylogenetic systematics and the relevancy of his work for the future of cladistics.

Although many archaeologists have a good understanding of the basics in computer science, statistics, geostatistics, modeling, and data mining, more literature is needed about the advanced analysis in these areas. This book aids archaeologists in learning more advanced tools and methods while also helping mathematicians, statisticians, and computer scientists with no previous knowledge of the field realize the potential of the methods in archaeological experiments.