Mitonuclear Ecology

This novel text provides a concise synthesis of how the interactions between mitochondrial and nuclear genes have played a major role in shaping the ecology and evolution of eukaryotes. The foundation for this new focus on mitonuclear interactions originated from research in biochemistry and cell biology laboratories, although the broader ecological and evolutionary implications have yet to be fully explored. The imperative for mitonuclear coadaptation is proposed to be a major selective force in the evolution of sexual reproduction and two mating types in eukaryotes, in the formation of species, in the evolution of ornaments and sexual selection, in the process of adaptation, and in the evolution of senescence. The book highlights the importance of mitonuclear coadaptation to the evolution of complex life and champions mitonuclear ecology as an important subdiscipline in ecology and evolution.

A fully updated guide to the increasingly prevalent use of molecular data in ecological studies Molecular ecology is concerned with how molecular biology and population genetics may help us to better understand aspects of ecology and evolution including local adaptation, dispersal across landscapes, phylogeography, behavioral ecology, and conservation biology. As the technology driving genetic science has advanced, so too has this fast-moving and innovative discipline, providing important insights into virtually all taxonomic groups. This third edition of Molecular Ecology takes account of the breakthroughs achieved in recent years to give readers a thorough and up-to-date account of the field as it is today. New topics covered in this book include next-generation sequencing, metabarcoding, environmental DNA (eDNA) assays, and epigenetics. As one of molecular ecology’s leading figures, author Joanna Freeland also provides those new to the area with a full grounding in its fundamental concepts and principles. This important text: Is presented in an accessible, user-friendly manner Offers a comprehensive introduction to molecular ecology Has been revised to reflect the field’s most recent studies and research developments Includes new chapters covering topics such as landscape genetics, metabarcoding, and community genetics Rich in insights that will benefit anyone interested in the ecology and evolution of natural populations, Molecular Ecology is an ideal guide for all students and professionals who wish to learn more about this exciting field.

Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functional genes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is now a rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using a diversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmental DNA.

Adaptive radiation is the evolution of diversity within a rapidly multiplying lineage. It can cause a single ancestral species to differentiate into an impressively vast array of species inhabiting a variety of environments. Much of life's diversity has arisen during adaptive radiations. Some of the most famous recent examples include the East African cichlid fishes, the Hawaiian silverswords, and of course, Darwin's Gal--aacute--;pagos finches,. This book evaluates the causes of adaptive radiation. It focuses on the 'ecological' theory of adaptive radiation, a body of ideas that began with Darwin and was developed through the early part of the 20th Century. This theory proposes that phenotypic divergence and speciation in adaptive radiation are caused ultimately by divergent natural selection arising from differences in environment and competition between species. In The Ecology of Adaptive Radiation the author re-evaluates the ecological theory, along with its most significant extensions and challenges, in the light of all the recent evidence. This important book is the first full exploration of the causes of adaptive radiation to be published for decades, written by one of the world's best young evolutionary biologists.

This book introduces readers to a set of powerful and extremely flexible modeling techniques, starting at "square one" and continuing with carefully chosen applications. Some of these applications of methodology include insect oviposition behavior, overwinter survival of birds and fish, avian migration, resource management, conservation biology, agroecology, and human behavior. This book also explains how to construct, test, and use dynamic state variable models in a wide range of contexts in evolutionary ecology, and its complete and up-to-date coverage allows readers to immediately begin using the described techniques. Dynamic State Variable Models in Ecology is designed for self-instruction or for use in upper division undergraduate or graduate courses. It is ideal for students and scientists interested in behavior, ecology, anthropology, conservation biology, and related fields.

Evolutionary Behavioral Ecology presents a comprehensive treatment of theevolutionary and ecological processes shaping behavior across a wide array of organisms and a diverse set of behaviors and is suitable as a graduate-level text and as a sourcebook for professional scientists.

Competition between species arises when two or more species share at least some of the same limited resources. It is likely to affect all species, as well as many higher-level aspects of community and ecosystem dynamics. Interspecific competition shares many of the same features as density dependence (intraspecific competition) and evolution (competition between genotypes). In spite of this, a robust theoretical framework is not yet in place to develop a more coherent understanding of this important interaction. Despite its prominence in the ecological literature, the theory seems to have lost direction in recent decades, with many synthetic papers promoting outdated ideas, failing to use resource-based models, and having little utility in applied fields such as conservation and environmental management. Competition theory has done little to incorporate new findings regarding consumer-resource interactions in the context of larger food webs containing behaviourally or evolutionarily adapting components. Overly simple models and methods of analysis continue to be influential. Competition Theory in Ecology represents a timely opportunity to address these shortcomings and suggests a more useful approach to modelling that can provide a basis for future models that have greater predictive ability in both ecology and evolution. The book concludes with some broader observations on the lack of agreement on general principles to use in constructing mathematical models to help understand ecological systems. It argues that a more open discussion and debate of the underlying structure of ecological theory is now urgently required to move the field forward.

In ecosystems with many species, food webs form highly complex networks of resource-consumer interactions. At the same time, the food web as itself needs sufficient resources to develop and survive. So in fact, food web ecology is about how natural resources form the basis of biological communities, in terms of species richness and abundances as well as how species are organised in communities on the basis of the resource availability and use. The central theme of this book is that patterns in the utilisation of energy result from the trophic interactions among species, and that these patterns form the basis of ecosystem stability. The authors integrate the latest work on community dynamics, ecosystem energetics, and stability, and in so doing attempt to dispel the categorisation of the field into the separate subdisciplines of population, community, and ecosystem ecology. Energetic Food Webs represents the first attempt to bridge the gap between the energetic and species approaches to ecology.