Organohalide Respiring Bacteria

This book summarizes the current state of knowledge concerning bacteria that use halogenated organic compounds as respiratory electron acceptors. The discovery of organohalide-respiring bacteria has expanded the range of electron acceptors used for energy conservation, and serves as a prime example of how scientific discoveries are enabling innovative engineering solutions that have transformed remediation practice. Individual chapters provide in-depth background information on the discovery, isolation, phylogeny, biochemistry, genomic features, and ecology of individual organohalide-respiring genera, including Dehalococcoides, Dehalogenimonas, Dehalobacter, Desulfitobacterium and Sulfurospirillum, as well as organohalide-respiring members of the Deltaproteobacteria. The book introduces readers to the fascinating biology of organohalide-respiring bacteria, offering a valuable resource for students, engineers and practitioners alike.

Microbial reductive dehalogenation mediated by organohalide-respiring bacteria plays a critical role in the natural halogen cycle, representing a promising solution for removal of organohalide pollutants. This Research Topic presents many of the more recent advances that have been made in this area. Authors from leading research groups contributed to this eBook, and provided mechanistic insights into organohalide respiration, as well as their bioremediation implications, at molecular, cellular, community and system levels.

Biodegradative Bacteria highlights the novel nature of bacterial cell functions in the field of biodegradation by putting them into three parts: (1) Genetic and genomic systems, (2) Degradative enzyme systems, and (3) Bacterial behavior in natural environmental systems. The first part of the book includes cell functions as degradative machinery, genome systems for effective degradation, and the evolution of degradative systems by mobile genetic elements. The second part deals with the structure, function, evolution, diversity, and application of degradative and related enzymes. The third part presents cell or genomic behaviors of biodegradative bacteria in natural ecosystems. Bacterial metabolic capacity, which plays an important role in the global material cycle, contributes significantly to the buffering capacity for the huge and unintended release of various chemicals. Recently, however, the prosperity and globalization of material civilization has led not only to severe local contamination by hazardous chemicals, but also to continuous increment of contaminant concentrations worldwide. To solve such urgent global issues, bacterial functions that are involved in biodegradation of hazardous chemicals have been analyzed. The term “biodegradative bacteria” refers to those bacteria that have the ability to degrade such xenobiotic (man-made) and/or hazardous chemicals. Analyses of biodegradative bacteria include diverse areas of study, such as genetics, enzymology, genomics, cell physiology, ecology, and evolutionary biology. In other words, the targets investigated in research on biodegradative bacteria include single molecules, single cell systems, bacterial consortia (interaction with surrounding microorganisms), and interaction with surrounding biotic and abiotic materials. Such complexity makes the research on biodegradative bacteria difficult but quite interesting.

Handbook of Bioremediation: Physiological, Molecular and Biotechnological Interventions discusses the mechanisms of responding to inorganic and organic pollutants in the environment using different approaches of phytoremediation and bioremediation. Part One focuses specifically on inorganic pollutants and the use of techniques such as metallothionein-assisted remediation, phytoextraction and genetic manipulation. Part Two covers organic pollutants and consider topics such as plant enzymes, antioxidant defense systems and the remediation mechanisms of different plant species. This comprehensive volume is a must-read for researchers interested in plant science, agriculture, soil science and environmental science. The techniques covered in this book will ensure scientists have the knowledge to practice effective bioremediation techniques themselves. Provides a comprehensive review of the latest advances in bioremediation of organic and inorganic pollutants Discusses a range of different phytoremediation techniques Evaluates the role of genomics and bioinformatics within bioremediation

Advances in Microbial Physiology, Volume 74, the latest release in this ongoing series, continues the long tradition of topical, important, cutting-edge reviews in microbiology. The book contains updates in the field, with comprehensive chapters covering The electrifying physiology of Geobacter bacteria 30 years on, Adaptive morphogenesis in bacteria, Bacterial energetics and respiratory metabolism, Bacteria respiration during infection, Regulation of Organohalide Respiration, Bioenergetics of Campylobacter jejuni, Formate Hydrogenlyases, Bioenergetical Aspects of the Bacterial and Archaeal Hydrogen Metabolism, and more. Contains contributions from leading authorities in microbial physiology Informs and updates on all the latest developments in the field of microbial physiology

Groundwater Ecology and Evolution, Second Edition is designed to meet a multitude of audience needs. The state of the art in the discipline is provided by the articulation of six sections. The first three sections successively carry the reader into the basic attributes of groundwater ecosystems (section 1), the drivers and patterns of biodiversity (section 2), and the roles of organisms in groundwater ecosystems (section 3). The next two sections are devoted to evolutionary processes driving the acquisition of subterranean biological traits (section 4) and the way these traits are differently expressed among groundwater organisms (section 5). Finally, section 6 shows how knowledge acquired among multiple research fields (sections 1 to 5) is used to manage groundwater biodiversity and ecosystem services in the face of future groundwater resource use scenarios. Emphasis on the coherence and prospects of the whole book is given in the introduction and conclusion. Provides a modern synthesis of research dedicated to the study of groundwater biodiversity and ecosystems Bridges the gap between community ecology, evolution, and functional ecology, three research fields that have long been presented isolated from each other Explains how this trans-disciplinary integration of research contributes to understanding and managing of groundwater ecosystem functions Reveals the contribution of groundwater ecology and evolution in solving scientific questions well beyond the frontiers of groundwater systems