Elastic Shape Analysis Of Three Dimensional Objects

Statistical analysis of shapes of 3D objects is an important problem with a wide range of applications. This analysis is difficult for many reasons, including the fact that objects differ in both geometry and topology. In this manuscript, we narrow the problem by focusing on objects with fixed topology, say objects that are diffeomorphic to unit spheres, and develop tools for analyzing their geometries. The main challenges in this problem are to register points across objects and to perform analysis while being invariant to certain shape-preserving transformations. We develop a comprehensive framework for analyzing shapes of spherical objects, i.e., objects that are embeddings of a unit sphere in ℝ, including tools for: quantifying shape differences, optimally deforming shapes into each other, summarizing shape samples, extracting principal modes of shape variability, and modeling shape variability associated with populations. An important strength of this framework is that it is elastic: it performs alignment, registration, and comparison in a single unified framework, while being invariant to shape-preserving transformations. The approach is essentially Riemannian in the following sense. We specify natural mathematical representations of surfaces of interest, and impose Riemannian metrics that are invariant to the actions of the shape-preserving transformations. In particular, they are invariant to reparameterizations of surfaces. While these metrics are too complicated to allow broad usage in practical applications, we introduce a novel representation, termed square-root normal fields (SRNFs), that transform a particular invariant elastic metric into the standard L2 metric. As a result, one can use standard techniques from functional data analysis for registering, comparing, and summarizing shapes. Specifically, this results in: pairwise registration of surfaces; computation of geodesic paths encoding optimal deformations; computation of Karcher means and covariances under the shape metric; tangent Principal Component Analysis (PCA) and extraction of dominant modes of variability; and finally, modeling of shape variability using wrapped normal densities. These ideas are demonstrated using two case studies: the analysis of surfaces denoting human bodies in terms of shape and pose variability; and the clustering and classification of the shapes of subcortical brain structures for use in medical diagnosis. This book develops these ideas without assuming advanced knowledge in differential geometry and statistics. We summarize some basic tools from differential geometry in the appendices, and introduce additional concepts and terminology as needed in the individual chapters.

An in-depth description of the state-of-the-art of 3D shape analysis techniques and their applications This book discusses the different topics that come under the title of "3D shape analysis". It covers the theoretical foundations and the major solutions that have been presented in the literature. It also establishes links between solutions proposed by different communities that studied 3D shape, such as mathematics and statistics, medical imaging, computer vision, and computer graphics. The first part of 3D Shape Analysis: Fundamentals, Theory, and Applications provides a review of the background concepts such as methods for the acquisition and representation of 3D geometries, and the fundamentals of geometry and topology. It specifically covers stereo matching, structured light, and intrinsic vs. extrinsic properties of shape. Parts 2 and 3 present a range of mathematical and algorithmic tools (which are used for e.g., global descriptors, keypoint detectors, local feature descriptors, and algorithms) that are commonly used for the detection, registration, recognition, classification, and retrieval of 3D objects. Both also place strong emphasis on recent techniques motivated by the spread of commodity devices for 3D acquisition. Part 4 demonstrates the use of these techniques in a selection of 3D shape analysis applications. It covers 3D face recognition, object recognition in 3D scenes, and 3D shape retrieval. It also discusses examples of semantic applications and cross domain 3D retrieval, i.e. how to retrieve 3D models using various types of modalities, e.g. sketches and/or images. The book concludes with a summary of the main ideas and discussions of the future trends. 3D Shape Analysis: Fundamentals, Theory, and Applications is an excellent reference for graduate students, researchers, and professionals in different fields of mathematics, computer science, and engineering. It is also ideal for courses in computer vision and computer graphics, as well as for those seeking 3D industrial/commercial solutions.

Over the past 15 years, there has been a growing need in the medical image computing community for principled methods to process nonlinear geometric data. Riemannian geometry has emerged as one of the most powerful mathematical and computational frameworks for analyzing such data. Riemannian Geometric Statistics in Medical Image Analysis is a complete reference on statistics on Riemannian manifolds and more general nonlinear spaces with applications in medical image analysis. It provides an introduction to the core methodology followed by a presentation of state-of-the-art methods. Content includes: - The foundations of Riemannian geometric methods for statistics on manifolds with emphasis on concepts rather than on proofs - Applications of statistics on manifolds and shape spaces in medical image computing - Diffeomorphic deformations and their applications As the methods described apply to domains such as signal processing (radar signal processing and brain computer interaction), computer vision (object and face recognition), and other domains where statistics of geometric features appear, this book is suitable for researchers and graduate students in medical imaging, engineering and computer science. - A complete reference covering both the foundations and state-of-the-art methods - Edited and authored by leading researchers in the field - Contains theory, examples, applications, and algorithms - Gives an overview of current research challenges and future applications

Academic Press Library in Signal Processing, Volume 6: Image and Video Processing and Analysis and Computer Vision is aimed at university researchers, post graduate students and R&D engineers in the industry, providing a tutorial-based, comprehensive review of key topics and technologies of research in both image and video processing and analysis and computer vision. The book provides an invaluable starting point to the area through the insight and understanding that it provides. With this reference, readers will quickly grasp an unfamiliar area of research, understand the underlying principles of a topic, learn how a topic relates to other areas, and learn of research issues yet to be resolved. Presents a quick tutorial of reviews of important and emerging topics of research Explores core principles, technologies, algorithms and applications Edited and contributed by international leading figures in the field Includes comprehensive references to journal articles and other literature upon which to build further, more detailed knowledge

This book focuses on the fundamentals and recent advances in RGB-D imaging as well as covering a range of RGB-D applications. The topics covered include: data acquisition, data quality assessment, filling holes, 3D reconstruction, SLAM, multiple depth camera systems, segmentation, object detection, salience detection, pose estimation, geometric modelling, fall detection, autonomous driving, motor rehabilitation therapy, people counting and cognitive service robots. The availability of cheap RGB-D sensors has led to an explosion over the last five years in the capture and application of colour plus depth data. The addition of depth data to regular RGB images vastly increases the range of applications, and has resulted in a demand for robust and real-time processing of RGB-D data. There remain many technical challenges, and RGB-D image processing is an ongoing research area. This book covers the full state of the art, and consists of a series of chapters by internationally renowned experts in the field. Each chapter is written so as to provide a detailed overview of that topic. RGB-D Image Analysis and Processing will enable both students and professional developers alike to quickly get up to speed with contemporary techniques, and apply RGB-D imaging in their own projects.

This textbook for courses on function data analysis and shape data analysis describes how to define, compare, and mathematically represent shapes, with a focus on statistical modeling and inference. It is aimed at graduate students in analysis in statistics, engineering, applied mathematics, neuroscience, biology, bioinformatics, and other related areas. The interdisciplinary nature of the broad range of ideas covered—from introductory theory to algorithmic implementations and some statistical case studies—is meant to familiarize graduate students with an array of tools that are relevant in developing computational solutions for shape and related analyses. These tools, gleaned from geometry, algebra, statistics, and computational science, are traditionally scattered across different courses, departments, and disciplines; Functional and Shape Data Analysis offers a unified, comprehensive solution by integrating the registration problem into shape analysis, better preparing graduate students for handling future scientific challenges. Recently, a data-driven and application-oriented focus on shape analysis has been trending. This text offers a self-contained treatment of this new generation of methods in shape analysis of curves. Its main focus is shape analysis of functions and curves—in one, two, and higher dimensions—both closed and open. It develops elegant Riemannian frameworks that provide both quantification of shape differences and registration of curves at the same time. Additionally, these methods are used for statistically summarizing given curve data, performing dimension reduction, and modeling observed variability. It is recommended that the reader have a background in calculus, linear algebra, numerical analysis, and computation.