Graph Mining

What does the Web look like? How can we find patterns, communities, outliers, in a social network? Which are the most central nodes in a network? These are the questions that motivate this work. Networks and graphs appear in many diverse settings, for example in social networks, computer-communication networks (intrusion detection, traffic management), protein-protein interaction networks in biology, document-text bipartite graphs in text retrieval, person-account graphs in financial fraud detection, and others. In this work, first we list several surprising patterns that real graphs tend to follow. Then we give a detailed list of generators that try to mirror these patterns. Generators are important, because they can help with "what if" scenarios, extrapolations, and anonymization. Then we provide a list of powerful tools for graph analysis, and specifically spectral methods (Singular Value Decomposition (SVD)), tensors, and case studies like the famous "pageRank" algorithm and the "HITS" algorithm for ranking web search results. Finally, we conclude with a survey of tools and observations from related fields like sociology, which provide complementary viewpoints. Table of Contents: Introduction / Patterns in Static Graphs / Patterns in Evolving Graphs / Patterns in Weighted Graphs / Discussion: The Structure of Specific Graphs / Discussion: Power Laws and Deviations / Summary of Patterns / Graph Generators / Preferential Attachment and Variants / Incorporating Geographical Information / The RMat / Graph Generation by Kronecker Multiplication / Summary and Practitioner's Guide / SVD, Random Walks, and Tensors / Tensors / Community Detection / Influence/Virus Propagation and Immunization / Case Studies / Social Networks / Other Related Work / Conclusions

This text takes a focused and comprehensive look at mining data represented as a graph, with the latest findings and applications in both theory and practice provided. Even if you have minimal background in analyzing graph data, with this book you’ll be able to represent data as graphs, extract patterns and concepts from the data, and apply the methodologies presented in the text to real datasets. There is a misprint with the link to the accompanying Web page for this book. For those readers who would like to experiment with the techniques found in this book or test their own ideas on graph data, the Web page for the book should be http://www.eecs.wsu.edu/MGD.

Managing and Mining Graph Data is a comprehensive survey book in graph management and mining. It contains extensive surveys on a variety of important graph topics such as graph languages, indexing, clustering, data generation, pattern mining, classification, keyword search, pattern matching, and privacy. It also studies a number of domain-specific scenarios such as stream mining, web graphs, social networks, chemical and biological data. The chapters are written by well known researchers in the field, and provide a broad perspective of the area. This is the first comprehensive survey book in the emerging topic of graph data processing. Managing and Mining Graph Data is designed for a varied audience composed of professors, researchers and practitioners in industry. This volume is also suitable as a reference book for advanced-level database students in computer science and engineering.

Discover Novel and Insightful Knowledge from Data Represented as a GraphPractical Graph Mining with R presents a "do-it-yourself" approach to extracting interesting patterns from graph data. It covers many basic and advanced techniques for the identification of anomalous or frequently recurring patterns in a graph, the discovery of groups or cluste

Graphs naturally represent information ranging from links between web pages, to communication in email networks, to connections between neurons in our brains. These graphs often span billions of nodes and interactions between them. Within this deluge of interconnected data, how can we find the most important structures and summarize them? How can we efficiently visualize them? How can we detect anomalies that indicate critical events, such as an attack on a computer system, disease formation in the human brain, or the fall of a company? This book presents scalable, principled discovery algorithms that combine globality with locality to make sense of one or more graphs. In addition to fast algorithmic methodologies, we also contribute graph-theoretical ideas and models, and real-world applications in two main areas: Individual Graph Mining: We show how to interpretably summarize a single graph by identifying its important graph structures. We complement summarization with inference, which leverages information about few entities (obtained via summarization or other methods) and the network structure to efficiently and effectively learn information about the unknown entities. Collective Graph Mining: We extend the idea of individual-graph summarization to time-evolving graphs, and show how to scalably discover temporal patterns. Apart from summarization, we claim that graph similarity is often the underlying problem in a host of applications where multiple graphs occur (e.g., temporal anomaly detection, discovery of behavioral patterns), and we present principled, scalable algorithms for aligning networks and measuring their similarity. The methods that we present in this book leverage techniques from diverse areas, such as matrix algebra, graph theory, optimization, information theory, machine learning, finance, and social science, to solve real-world problems. We present applications of our exploration algorithms to massive datasets, including a Web graph of 6.6 billion edges, a Twitter graph of 1.8 billion edges, brain graphs with up to 90 million edges, collaboration, peer-to-peer networks, browser logs, all spanning millions of users and interactions.

This book concentrates on mining networks, a subfield within data science. Data science uses scientific and computational tools to extract valuable knowledge from large data sets. Once data is processed and cleaned, it is analyzed and presented to support decision-making processes. Data science and machine learning tools have become widely used in companies of all sizes. Networks are often large-scale, decentralized, and evolve dynamically over time. Mining complex networks aim to understand the principles governing the organization and the behavior of such networks is crucial for a broad range of fields of study. Here are a few selected typical applications of mining networks: Community detection (which users on some social media platforms are close friends). Link prediction (who is likely to connect to whom on such platforms). Node attribute prediction (what advertisement should be shown to a given user of a particular platform to match their interests). Influential node detection (which social media users would be the best ambassadors of a specific product). This textbook is suitable for an upper-year undergraduate course or a graduate course in programs such as data science, mathematics, computer science, business, engineering, physics, statistics, and social science. This book can be successfully used by all enthusiasts of data science at various levels of sophistication to expand their knowledge or consider changing their career path. Jupiter notebooks (in Python and Julia) accompany the book and can be accessed on https://www.ryerson.ca/mining-complex-networks/. These not only contain all the experiments presented in the book, but also include additional material. Bogumił Kamiński is the Chairman of the Scientific Council for the Discipline of Economics and Finance at SGH Warsaw School of Economics. He is also an Adjunct Professor at the Data Science Laboratory at Ryerson University. Bogumił is an expert in applications of mathematical modeling to solving complex real-life problems. He is also a substantial open-source contributor to the development of the Julia language and its package ecosystem. Paweł Prałat is a Professor of Mathematics in Ryerson University, whose main research interests are in random graph theory, especially in modeling and mining complex networks. He is the Director of Fields-CQAM Lab on Computational Methods in Industrial Mathematics in The Fields Institute for Research in Mathematical Sciences and has pursued collaborations with various industry partners as well as the Government of Canada. He has written over 170 papers and three books with 130 plus collaborators. François Théberge holds a B.Sc. degree in applied mathematics from the University of Ottawa, a M.Sc. in telecommunications from INRS and a PhD in electrical engineering from McGill University. He has been employed by the Government of Canada since 1996 where he was involved in the creation of the data science team as well as the research group now known as the Tutte Institute for Mathematics and Computing. He also holds an adjunct professorial position in the Department of Mathematics and Statistics at the University of Ottawa. His current interests include relational-data mining and deep learning.

This book describes exciting new opportunities for utilizing robust graph representations of data with common machine learning algorithms. Graphs can model additional information which is often not present in commonly used data representations, such as vectors. Through the use of graph distance — a relatively new approach for determining graph similarity — the authors show how well-known algorithms, such as k-means clustering and k-nearest neighbors classification, can be easily extended to work with graphs instead of vectors. This allows for the utilization of additional information found in graph representations, while at the same time employing well-known, proven algorithms. To demonstrate and investigate these novel techniques, the authors have selected the domain of web content mining, which involves the clustering and classification of web documents based on their textual substance. Several methods of representing web document content by graphs are introduced; an interesting feature of these representations is that they allow for a polynomial time distance computation, something which is typically an NP-complete problem when using graphs. Experimental results are reported for both clustering and classification in three web document collections using a variety of graph representations, distance measures, and algorithm parameters. In addition, this book describes several other related topics, many of which provide excellent starting points for researchers and students interested in exploring this new area of machine learning further. These topics include creating graph-based multiple classifier ensembles through random node selection and visualization of graph-based data using multidimensional scaling. Contents:Introduction to Web MiningGraph Similarity TechniquesGraph Models for Web DocumentsGraph-Based ClusteringGraph-Based ClassificationThe Graph Hierarchy Construction Algorithm for Web Search Clustering Readership: Researchers and graduate students who are interested in computer science, specifically machine learning. Also of interest to researchers in academia or industry in disciplines such as information science or information technology who are interested in text and web documents. Keywords:Graph;Machine Learning;Web Mining;Data Mining;Clustering;Classification;Graph Distance;Maximum Common SubgraphKey Features:Opens up exciting new possibilities for utilizing graphs in common machine learning algorithmsPresents experimental results comparing differing graph representations and graph distance measuresProvides a review of graph-theoretic similarity techniques

Graph data is powerful, thanks to its ability to model arbitrary relationship between objects and is encountered in a range of real-world applications in fields such as bioinformatics, traffic network, scientific collaboration, world wide web and social networks. Graph data mining is used to discover useful information and knowledge from graph data. The complications of nodes, links and the semi-structure form present challenges in terms of the computation tasks, e.g., node classification, link prediction, and graph classification. In this context, various advanced techniques, including graph embedding and graph neural networks, have recently been proposed to improve the performance of graph data mining. This book provides a state-of-the-art review of graph data mining methods. It addresses a current hot topic – the security of graph data mining – and proposes a series of detection methods to identify adversarial samples in graph data. In addition, it introduces readers to graph augmentation and subgraph networks to further enhance the models, i.e., improve their accuracy and robustness. Lastly, the book describes the applications of these advanced techniques in various scenarios, such as traffic networks, social and technical networks, and blockchains.