Knots Molecules And The Universe

This book is an elementary introduction to geometric topology and its applications to chemistry, molecular biology, and cosmology. It does not assume any mathematical or scientific background, sophistication, or even motivation to study mathematics. It is meant to be fun and engaging while drawing students in to learn about fundamental topological and geometric ideas. Though the book can be read and enjoyed by nonmathematicians, college students, or even eager high school students, it is intended to be used as an undergraduate textbook. The book is divided into three parts corresponding to the three areas referred to in the title. Part 1 develops techniques that enable two- and three-dimensional creatures to visualize possible shapes for their universe and to use topological and geometric properties to distinguish one such space from another. Part 2 is an introduction to knot theory with an emphasis on invariants. Part 3 presents applications of topology and geometry to molecular symmetries, DNA, and proteins. Each chapter ends with exercises that allow for better understanding of the material. The style of the book is informal and lively. Though all of the definitions and theorems are explicitly stated, they are given in an intuitive rather than a rigorous form, with several hundreds of figures illustrating the exposition. This allows students to develop intuition about topology and geometry without getting bogged down in technical details.

"Knot theory has proven to be a fascinating area of mathematical research, dating back about 150 years. Encyclopedia of Knot Theory provides short, interconnected articles on a variety of active areas in knot theory, and includes beautiful pictures, deep mathematical connections, and critical applications. Many of the articles in this book are accessible to undergraduates who are working on research or taking an advanced undergraduate course in knot theory. More advanced articles will be useful to graduate students working on a related thesis topic, to researchers in another area of topology who are interested in current results in knot theory, and to scientists who study the topology and geometry of biopolymers. Features Provides material which is useful and accessible to undergraduates, post-graduates, and full-time researchers Topics discussed provide an excellent catalyst for students to explore meaningful research and gain confidence and commitment to pursuing advanced degrees Edited and contributed to by top researchers in the field of Knot Theory"--

This volume is a collection of research papers devoted to the study of relationships between knot theory and the foundations of mathematics, physics, chemistry, biology and psychology. Included are reprints of the work of Lord Kelvin (Sir William Thomson) on the 19th century theory of vortex atoms, reprints of modern papers on knotted flux in physics and in fluid dynamics and knotted wormholes in general relativity. It also includes papers on Witten's approach to knots via quantum field theory and applications of this approach to quantum gravity and the Ising model in three dimensions. Other papers discuss the topology of RNA folding in relation to invariants of graphs and Vassiliev invariants, the entanglement structures of polymers, the synthesis of molecular Mobius strips and knotted molecules. The book begins with an article on the applications of knot theory to the foundations of mathematics and ends with an article on topology and visual perception. This volume will be of immense interest to all workers interested in new possibilities in the uses of knots and knot theory.

"Knot theory is a fascinating mathematical subject, with multiple links to theoretical physics. This enyclopedia is filled with valuable information on a rich and fascinating subject." – Ed Witten, Recipient of the Fields Medal "I spent a pleasant afternoon perusing the Encyclopedia of Knot Theory. It’s a comprehensive compilation of clear introductions to both classical and very modern developments in the field. It will be a terrific resource for the accomplished researcher, and will also be an excellent way to lure students, both graduate and undergraduate, into the field." – Abigail Thompson, Distinguished Professor of Mathematics at University of California, Davis Knot theory has proven to be a fascinating area of mathematical research, dating back about 150 years. Encyclopedia of Knot Theory provides short, interconnected articles on a variety of active areas in knot theory, and includes beautiful pictures, deep mathematical connections, and critical applications. Many of the articles in this book are accessible to undergraduates who are working on research or taking an advanced undergraduate course in knot theory. More advanced articles will be useful to graduate students working on a related thesis topic, to researchers in another area of topology who are interested in current results in knot theory, and to scientists who study the topology and geometry of biopolymers. Features Provides material that is useful and accessible to undergraduates, postgraduates, and full-time researchers Topics discussed provide an excellent catalyst for students to explore meaningful research and gain confidence and commitment to pursuing advanced degrees Edited and contributed by top researchers in the field of knot theory

The first three chapters of this book introduce the reader to knot theory, topological chirality and molecular symmetry, and DNA topology. The second half of the book is focused on three particular applications of knot theory.

In this second edition, the following recent papers have been added: “Gauss Codes, Quantum Groups and Ribbon Hopf Algebras”, “Spin Networks, Topology and Discrete Physics”, “Link Polynomials and a Graphical Calculus” and “Knots Tangles and Electrical Networks”. An appendix with a discussion on invariants of embedded graphs and Vassiliev invariants has also been included. This book is an introduction to knot and link invariants as generalized amplitudes (vacuum–vacuum amplitudes) for a quasi-physical process. The demands of knot theory, coupled with a quantum statistical framework, create a context that naturally and powerfully includes an extraordinary range of interrelated topics in topology and mathematical physics. The author takes a primarily combinatorial stance toward knot theory and its relations with these subjects. This has the advantage of providing very direct access to the algebra and to the combinatorial topology, as well as the physical ideas. This book is divided into 2 parts: Part I of the book is a systematic course in knots and physics starting from the ground up. Part II is a set of lectures on various topics related to and sometimes based on Part I. Part II also explores some side-topics such as frictional properties of knots, relations with combinatorics and knots in dynamical systems. Contents:Physical KnotsStates and the Bracket PolynomialThe Jones Polynomial and Its GeneralizationsBraids and the Jones PolynomialFormal Feynman Diagrams, Bracket as a Vacuum-Vacuum Expectation and the Quantum Group SL(2)qYang-Baxter Models for Specializations of the Homfly PolynomialThe Alexander PolynomialKnot-Crystals — Classical Knot Theory in Modern GuiseThe Kauffman PolynomialThree Manifold Invariants from the Jones PolynomialIntegral Heuristics and Witten' s InvariantsThe Chromatic PolynomialThe Potts Model and the Dichromatic PolynomialThe Penrose Theory of Spin NetworksKnots and Strings — Knotted StringsDNA and Quantum Field TheoryKnots in Dynamical Systems — The Lorenz Attractorand other papers Readership: Physicists, mathematical physicists and mathematicians. keywords: Reviews of the First Edition: “It is an attractive book for physicists with profuse and often entertaining illustrations … proofs … seldom heavy and nearly always well explained with pictures… succeeds in infusing his own excitement and enthusiasm for these discoveries and their potential implications.” Physics Today “… here is a gold mine where, with care and patience, one should get acquainted with a beautiful subject under the guidance of a most original and imaginative mind.” Mathematical Reviews

Plastics, films, and synthetic fibers are among typical examples of polymer materials fabricated industrially in massive quantities as the basis of modern social life. By comparison, polymers from biological resources, including proteins, DNAs, and cotton fibers, are essential in various processes in living systems. Such polymers are molecular substances, constituted by the linking of hundreds to tens of thousands of small chemical unit (monomer) components. Thus, the form of polymer molecules is frequently expressed by line geometries, and their linear and non-linear forms are believed to constitute the fundamental basis for their properties and functions. In the field of polymer chemistry and polymer materials science, the choice of macromolecules has continuously been extended from linear or randomly branched forms toward a variety of precisely controlled topologies by the introduction of intriguing synthetic techniques. Moreover, during the first decade of this century, a number of impressive breakthroughs have been achieved to produce an important class of polymers having a variety of cyclic and multicyclic topologies. These developments now offer unique opportunities in polymer materials design to create unique properties and functions based on the form, i.e., topology, of polymer molecules. The introduction and application of topological geometry (soft geometry) to polymer molecules is a crucial requirement to account for the basic geometrical properties of polymer chains uniquely flexible in nature, in contrast to small chemical compounds conceived upon Euclidian geometry (hard geometry) principles. Topological geometry and graph theory are introduced for the systematic classification and notation of the non-linear constructions of polymer molecules, including not only branched but also single cyclic and multicyclic polymer topologies. On that basis, the geometrical–topological relationship between different polymers having distinctive constructions is discussed. A unique conception of topological isomerism is thus formed, which contrasts with that of conventional constitutional and stereoisomerism occurring in small chemical compounds. Through the close collaboration of topology experts Shimokawa and Ishihara and the polymer chemist Tezuka, this monograph covers the fundamentals and selected current topics of topology applied in polymers and topological polymer chemistry. In particular, the aim is to provide novel insights jointly revealed through a unique interaction between mathematics (topology) and polymer materials science.

Exploring common themes in modern art, mathematics, and science, including the concept of space, the notion of randomness, and the shape of the cosmos. This is a book about art—and a book about mathematics and physics. In Lumen Naturae (the title refers to a purely immanent, non-supernatural form of enlightenment), mathematical physicist Matilde Marcolli explores common themes in modern art and modern science—the concept of space, the notion of randomness, the shape of the cosmos, and other puzzles of the universe—while mapping convergences with the work of such artists as Paul Cezanne, Mark Rothko, Sol LeWitt, and Lee Krasner. Her account, focusing on questions she has investigated in her own scientific work, is illustrated by more than two hundred color images of artworks by modern and contemporary artists. Thus Marcolli finds in still life paintings broad and deep philosophical reflections on space and time, and connects notions of space in mathematics to works by Paul Klee, Salvador Dalí, and others. She considers the relation of entropy and art and how notions of entropy have been expressed by such artists as Hans Arp and Fernand Léger; and traces the evolution of randomness as a mode of artistic expression. She analyzes the relation between graphical illustration and scientific text, and offers her own watercolor-decorated mathematical notebooks. Throughout, she balances discussions of science with explorations of art, using one to inform the other. (She employs some formal notation, which can easily be skipped by general readers.) Marcolli is not simply explaining art to scientists and science to artists; she charts unexpected interdependencies that illuminate the universe.