Microbes To Ecosystems

The University of Florida has an ambitious goal: to harness the power of its faculty, staff, students, and alumni to solve some of society’s most pressing problems and to become a resource for the state of Florida, the nation, and the world. In Microbes to Ecosystems, follow the scientists, researchers, and staff of the University of Florida’s Biodiversity Institute as they marshal unprecedented amounts of biological data to help us conserve species, adapt to climate change, and solve pressing environmental problems. With a twenty-first-century, interdisciplinary approach, the Biodiversity Institute unites some of the most prominent researchers and state-of-the-art resources in the biological sciences, genomics, and informatics. Together they innovate new methods and technologies to accelerate discovery, communicate data and understanding, and determine potential solutions for maintaining sustainable environments. Connections are critical to both ecological and computational systems, and the institute aims to build connections that can help us more effectively study and save biological diversity, including connecting perspectives between the natural sciences and social sciences and connecting scientific research to regulatory policy. Central to the institute’s efforts is the Florida Museum of Natural History—the second largest university-based natural history museum in the country and home to more than 40 million specimens and artifacts—and iDigBio, the national center for creating a digital catalog of the earth’s flora and fauna. The stories chronicled in Gatorbytes span all colleges and units across the UF campus. They detail the far-reaching impact of UF’s research, technologies, and innovations—and the UF faculty members dedicated to them. Gatorbytes describe how UF is continuing to build on its strengths and extend the reach of its efforts so that it can help even more people in even more places.

Fast growing human civilization and industrialization have resulted in increased amounts of pollutants such as pesticides, electronic wastes, etc. in the environment. These pollutants have hazardous impacts on living organisms including human health. Remediation of these contaminants is a serious environmental issue of current interest. Recent research has shown that soil microorganisms play an important role in remediating and improving disturbed ecosystems. This approach is eco-friendly and relatively less expensive. The investigations carried out using microbes for restoration of degraded eco-systems is covered in the proposed book.

Dr. Joshua Lederberg - scientist, Nobel laureate, visionary thinker, and friend of the Forum on Microbial Threats - died on February 2, 2008. It was in his honor that the Institute of Medicine's Forum on Microbial Threats convened a public workshop on May 20-21, 2008, to examine Dr. Lederberg's scientific and policy contributions to the marketplace of ideas in the life sciences, medicine, and public policy. The resulting workshop summary, Microbial Evolution and Co-Adaptation, demonstrates the extent to which conceptual and technological developments have, within a few short years, advanced our collective understanding of the microbiome, microbial genetics, microbial communities, and microbe-host-environment interactions.

This book describes the multitude of interactions between plant, soil, and micro-organisms. It emphasizes on how growth and development in plants, starting from seed germination, is heavily influenced by the soil type. It describes the interactions established by plants with soil and inhabitant microbial community. The chapters describe how plants selectively promote certain microorganisms in the rhizospheric ecozone to derive multifarious benefits such as nutrient acquisition and protection from diseases. The diversity of these rhizospheric microbes and their interactions with plants largely depend on plant genotype, soils attributes, and several abiotic and biotic factors. Most of the studies concerned with plant–microbe interaction are focused on temperate regions, even though the tropical ecosystems are more diverse and need more attention. Therefore, it is crucial to understand how soil type and climatic conditions influence the plant–soil–microbes interaction in the tropics. Considering the significance of the subject, the present volume is designed to cover the most relevant aspects of rhizospheric microbial interactions in tropical ecosystems. Chapters include aspects related to the diversity of rhizospheric microbes, as well as modern tools and techniques to assess the rhizospheric microbiomes and their functional roles. The book also covers applications of rhizospheric microbes and evaluation of prospects improving agricultural practice and productivity through the use of microbiome technologies. This book will be extremely interesting to microbiologists, plant biologists, and ecologists.

Tropical ecosystems are different in important ways from those of temperate regions. They are a major reservoir of plant and animal biodiversity and play important roles in global climate regulation and biogeochemical cycling. They are also under great threat due to the conversion of tropical ecosystems to other uses. Thus, in the context of global change, it is crucial to understand how environmental factors, biogeographic patterns, and land use changes interact to influence the structure and function of microbial communities in these ecosystems. The contributions to this Research Topic showcase the current knowledge regarding microbial ecology in tropical ecosystems, identify many challenges and questions that remain to be addressed and open up new horizons in our understanding of the environmental and anthropological factors controlling microbial communities in these important ecosystems.

Microorganisms are a major part of the Earth’s biological diversity. Although a lot of research has been done on microbial diversity, most of it is fragmented. This book creates the need for a unified text to be published, full of information about microbial diversity from highly reputed and impactful sources. Recent Advancements in Microbial Diversity brings a comprehensive understanding of the recent advances in microbial diversity research focused on different bodily systems, such as the gut. Recent Advancements in Microbial Diversity also discusses how the application of advanced sequencing technologies is used to reveal previously unseen microbial diversity and show off its function. Gives insight into microbial diversity in different bodily systems Explains novel approaches to studying microbial diversity Highlights the use of omics to analyze the microbial community and its functional attributes Discusses the techniques used to examine microbial diversity, including their applications and respective strengths and weaknesses

Oases of life around black smokers and hydrocarbon seeps in the deep-sea were among the most surprising scientific discoveries of the past three decades. These ecosystems are dominated by animals having symbiotic relationships with chemoautotrophic bacteria. Their study developed into an international, interdisciplinary venture where scientists develop new technologies to work in some of the most extreme places on Earth. This book highlights discoveries, developments, and advances made during the past 10 years, including remarkable cases of host-symbiont coevolution, worms living on frozen methane, and a fossil record providing insights into the dynamic history of these ecosystems since the Paleozoic.

The Preface to the first edition of this book explained the reasons for the publication of a comprehensive text on the rumen and rumen microbes in 1988. The microbes of the ruminant's forestomach and those in related organs in other animals and birds provide the means by which herbivorous animals can digest and obtain nutriment from vegetation. In turn, humans have relied, and still do rely, on herbivores for much of their food, clothing and motive power. Herbivores also form the food of carnivorous animals and birds in the wild. The importance of the rumen microorganisms is thus apparent. But, while a knowledge of rumen organisms is not strictly neces sary for the normal, practical feeding of farm animals, in recent years there has been much more emphasis on increasing the productivity of domesti cated animals and in rearing farm animals on unusual feedstuffs. Here, a knowledge of the reactions of the rumen flora, and the limits to these reactions, can be invaluable. In addition, anaerobic rumen-type microor ganisms are found in the intestines of omnivores, including humans, and can be implicated in diseases of humans and animals. They are also found in soils and natural waters, where they playa part in causing pollution and also in reducing it, while the same organisms confined in artificial systems are essential for the purification of sewage and other polluting and toxic wastes.