Statistical Methods For Field And Laboratory Studies In Behavioral Ecology

Statistical Methods for Field and Laboratory Studies in Behavioral Ecology focuses on how statistical methods may be used to make sense of behavioral ecology and other data. It presents fundamental concepts in statistical inference and intermediate topics such as multiple least squares regression and ANOVA. The objective is to teach students to recognize situations where various statistical methods should be used, understand the strengths and limitations of the methods, and to show how they are implemented in R code. Examples are based on research described in the literature of behavioral ecology, with data sets and analysis code provided. Features: This intermediate to advanced statistical methods text was written with the behavioral ecologist in mind Computer programs are provided, written in the R language. Datasets are also provided, mostly based, at least to some degree, on real studies. Methods and ideas discussed include multiple regression and ANOVA, logistic and Poisson regression, machine learning and model identification, time-to-event modeling, time series and stochastic modeling, game-theoretic modeling, multivariate methods, study design/sample size, and what to do when things go wrong. It is assumed that the reader has already had exposure to statistics through a first introductory course at least, and also has sufficient knowledge of R. However, some introductory material is included to aid the less initiated reader. Scott Pardo, Ph.D., is an accredited professional statistician (PStat®) by the American Statistical Association. Michael Pardo is a Ph.D. is a candidate in behavioral ecology at Cornell University, specializing in animal communication and social behavior.

Statistical Methods for Field and Laboratory Studies in Behavioral Ecology focuses on how statistical methods may be used to make sense of behavioral ecology and other data. It presents fundamental concepts in statistical inference and intermediate topics such as multiple least squares regression and ANOVA. The objective is to teach students to recognize situations where various statistical methods should be used, understand the strengths and limitations of the methods, and to show how they are implemented in R code. Examples are based on research described in the literature of behavioral ecology, with data sets and analysis code provided. Features: This intermediate to advanced statistical methods text was written with the behavioral ecologist in mind Computer programs are provided, written in the R language. Datasets are also provided, mostly based, at least to some degree, on real studies. Methods and ideas discussed include multiple regression and ANOVA, logistic and Poisson regression, machine learning and model identification, time-to-event modeling, time series and stochastic modeling, game-theoretic modeling, multivariate methods, study design/sample size, and what to do when things go wrong. It is assumed that the reader has already had exposure to statistics through a first introductory course at least, and also has sufficient knowledge of R. However, some introductory material is included to aid the less initiated reader. Scott Pardo, Ph.D., is an accredited professional statistician (PStat®) by the American Statistical Association. Michael Pardo is a Ph.D. is a candidate in behavioral ecology at Cornell University, specializing in animal communication and social behavior.

Designed to provide a variety of exercises that engage students actively in all phases of scientific investigation, from formulating research questions through interpreting and presenting final results. Suited to undergraduates, each chapter presents an animal behavior exercise tested by academic members of the Animal Behavior Society. Four types of exercises are presented: (1) traditional exercises in which students follow a pre-determined protocol to test particular hypotheses, (2) traditional exercises that can easily be adapted to inquiry-based approaches, (3) combined pedagogy exercises that involve both traditional and inquiry approaches, and (4) inquiry exercises in which students brainstorm to generate their own hypotheses, then design their own experiments to test them. Exercises cover descriptive ethology, causation and development of behavior, and behavioral ecology. Both field and laboratory exercises are included on arthropods, fish, amphibians, reptiles, birds, and mammals.

Field and Laboratory Exercises in Animal Behavior is an interactive laboratory manual for students in animal behavior, ethology, and behavioral ecology. It is the first of its kind in this subject area that guides students through the diverse and fascinating fields of behavioral and ethological studies, employing a wide array of organisms as model systems for the study of behavior. Students participate in the development of hypothesis and turn the recording, analysis, and interpretation of data into an active and engaging process. A teacher-friendly companion website provides extensive teaching notes on the background to each lab project, tips and hints for successful project presentation, sources for studying organisms, ideas for variations in labs, and alternate study organisms. This text is recommended for undergraduate courses in Animal Behavior, Ethology, and Behavioral Ecology. Provides fully developed and tested laboraty exercises Offers both field and lab experiences- adaptable for fall, spring, or summer courses Laboratories emphasize student thought and involvement in experimental design Includes an online supplement to the manual for teachers

This book describes the sampling and statistical methods used most often by behavioral ecologists and field biologists. Written by a biologist and two statisticians, it provides a rigorous discussion together with worked examples of statistical concepts and methods that are generally not covered in introductory courses, and which are consequently poorly understood and applied by field biologists. The first section reviews important issues such as defining the statistical population and the sampling plan when using nonrandom methods for sample selection, bias, interpretation of statistical tests, confidence intervals, and multiple comparisons. After a detailed discussion of sampling methods and multiple regression, subsequent chapters discuss specialized problems such as pseudoreplication, and their solutions. This volume will quickly become the favorite statistical handbook for all field biologists.

Modern ecological and environmental sciences are dominated by observational data. As a result, traditional statistical training often leaves scientists ill-prepared for the data analysis tasks they encounter in their work. Bayesian methods provide a more robust and flexible tool for data analysis, as they enable information from different sources to be brought into the modelling process. Bayesian Applications in Evnironmental and Ecological Studies with R and Stan provides a Bayesian framework for model formulation, parameter estimation, and model evaluation in the context of analyzing environmental and ecological data. Features: An accessible overview of Bayesian methods in environmental and ecological studies Emphasizes the hypothetical deductive process, particularly model formulation Necessary background material on Bayesian inference and Monte Carlo simulation Detailed case studies, covering water quality monitoring and assessment, ecosystem response to urbanization, fisheries ecology, and more Advanced chapter on Bayesian applications, including Bayesian networks and a change point model Complete code for all examples, along with the data used in the book, are available via GitHub The book is primarily aimed at graduate students and researchers in the environmental and ecological sciences, as well as environmental management professionals. This is a group of people representing diverse subject matter fields, who could benefit from the potential power and flexibility of Bayesian methods.

Many applied researchers equate spatial statistics with prediction or mapping, but this book naturally extends linear models, which includes regression and ANOVA as pillars of applied statistics, to achieve a more comprehensive treatment of the analysis of spatially autocorrelated data. Spatial Linear Models for Environmental Data, aimed at students and professionals with a master’s level training in statistics, presents a unique, applied, and thorough treatment of spatial linear models within a statistics framework. Two subfields, one called geostatistics and the other called areal or lattice models, are extensively covered. Zimmerman and Ver Hoef present topics clearly, using many examples and simulation studies to illustrate ideas. By mimicking their examples and R code, readers will be able to fit spatial linear models to their data and draw proper scientific conclusions. Topics covered include: Exploratory methods for spatial data including outlier detection, (semi)variograms, Moran’s I, and Geary’s c. Ordinary and generalized least squares regression methods and their application to spatial data. Suitable parametric models for the mean and covariance structure of geostatistical and areal data. Model-fitting, including inference methods for explanatory variables and likelihood-based methods for covariance parameters. Practical use of spatial linear models including prediction (kriging), spatial sampling, and spatial design of experiments for solving real world problems. All concepts are introduced in a natural order and illustrated throughout the book using four datasets. All analyses, tables, and figures are completely reproducible using open-source R code provided at a GitHub site. Exercises are given at the end of each chapter, with full solutions provided on an instructor’s FTP site supplied by the publisher.

Ecological dynamics are tremendously complicated and are studied at a variety of spatial and temporal scales. Ecologists often simplify analysis by describing changes in density of individuals across a landscape, and statistical methods are advancing rapidly for studying spatio-temporal dynamics. However, spatio-temporal statistics is often presented using a set of principles that may seem very distant from ecological theory or practice. This book seeks to introduce a minimal set of principles and numerical techniques for spatio-temporal statistics that can be used to implement a wide range of real-world ecological analyses regarding animal movement, population dynamics, community composition, causal attribution, and spatial dynamics. We provide a step-by-step illustration of techniques that combine core spatial-analysis packages in R with low-level computation using Template Model Builder. Techniques are showcased using real-world data from varied ecological systems, providing a toolset for hierarchical modelling of spatio-temporal processes. Spatio-Temporal Models for Ecologists is meant for graduate level students, alongside applied and academic ecologists. Key Features: Foundational ecological principles and analyses Thoughtful and thorough ecological examples Analyses conducted using a minimal toolbox and fast computation Code using R and TMB included in the book and available online