Computer Vision for Microscopy Image Analysis

Computer Vision for Microscopy Image Analysis
Author: Mei Chen
Publsiher: Academic Press
Total Pages: 230
Release: 2020-12-01
Genre: Computers
ISBN: 9780128149737

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Are you a computer scientist working on image analysis? Are you a biologist seeking tools to process the microscopy data from image-based experiments? Computer Vision for Microscopy Image Analysis provides a comprehensive and in-depth discussion of modern computer vision techniques, in particular deep learning, for microscopy image analysis that will advance your efforts. Progress in imaging techniques has enabled the acquisition of large volumes of microscopy data and made it possible to conduct large-scale, image-based experiments for biomedical discovery. The main challenge and bottleneck in such experiments is the conversion of "big visual data" into interpretable information. Visual analysis of large-scale microscopy data is a daunting task. Computer vision has the potential to automate this task. One key advantage is that computers perform analysis more reproducibly and less subjectively than human annotators. Moreover, high-throughput microscopy calls for effective and efficient techniques as there are not enough human resources to advance science by manual annotation. This book articulates the strong need for biologists and computer vision experts to collaborate to overcome the limits of human visual perception, and devotes a chapter each to the major steps in analyzing microscopy images, such as detection and segmentation, classification, tracking, and event detection. Discover how computer vision can automate and enhance the human assessment of microscopy images for discovery Grasp the state-of-the-art approaches, especially deep neural networks Learn where to obtain open-source datasets and software to jumpstart his or her own investigation

Computer Vision Approaches for Quantitative Analysis of Microscopy Images

Computer Vision Approaches for Quantitative Analysis of Microscopy Images
Author: Ella Bahry
Publsiher: Unknown
Total Pages: 135
Release: 2021*
Genre: Electronic Book
ISBN: OCLC:1286870821

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Computer Assisted Microscopy

Computer Assisted Microscopy
Author: John C. Russ
Publsiher: Springer Science & Business Media
Total Pages: 461
Release: 2012-12-06
Genre: Science
ISBN: 9781461305637

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The use of computer-based image analysis systems for all kinds of images, but especially for microscope images, has become increasingly widespread in recent years, as computer power has increased and costs have dropped. Software to perform each of the various tasks described in this book exists now, and without doubt additional algorithms to accomplish these same things more efficiently, and to perform new kinds of image processing, feature discrimination and measurement, will continue to be developed. This is likely to be true particularly in the field of three-dimensional imaging, since new microscopy methods are beginning to be used which can produce such data. It is not the intent of this book to train programmers who will assemble their own computer systems and write their own programs. Most users require only the barest of knowledge about how to use the computer, but the greater their understanding of the various image analysis operations which are possible, their advantages and limitations, the greater the likelihood of success in their application. Likewise, the book assumes little in the way of a mathematical background, but the researcher with a secure knowledge of appropriate statistical tests will find it easier to put some of these methods into real use, and have confidence in the results, than one who has less background and experience. Supplementary texts and courses in statistics, microscopy, and specimen preparation are recommended as necessary.

Image Technology

Image Technology
Author: Jorge L.C. Sanz
Publsiher: Springer Science & Business Media
Total Pages: 758
Release: 2012-12-06
Genre: Computers
ISBN: 9783642582882

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Image processing and machine vision are fields of renewed interest in the commercial market. People in industry, managers, and technical engineers are looking for new technologies to move into the market. Many of the most promising developments are taking place in the field of image processing and its applications. The book offers a broad coverage of advances in a range of topics in image processing and machine vision.

Digital Image Processing and Analysis

Digital Image Processing and Analysis
Author: Scott E Umbaugh
Publsiher: CRC Press
Total Pages: 977
Release: 2016-04-19
Genre: Technology & Engineering
ISBN: 9781439802069

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Whether for computer evaluation of otherworldly terrain or the latest high definition 3D blockbuster, digital image processing involves the acquisition, analysis, and processing of visual information by computer and requires a unique skill set that has yet to be defined a single text. Until now. Taking an applications-oriented, engineering approach, Digital Image Processing and Analysis provides the tools for developing and advancing computer and human vision applications and brings image processing and analysis together into a unified framework. Providing information and background in a logical, as-needed fashion, the author presents topics as they become necessary for understanding the practical imaging model under study. He offers a conceptual presentation of the material for a solid understanding of complex topics and discusses the theory and foundations of digital image processing and the algorithm development needed to advance the field. With liberal use of color through-out and more materials on the processing of color images than the previous edition, this book provides supplementary exercises, a new chapter on applications, and two major new tools that allow for batch processing, the analysis of imaging algorithms, and the overall research and development of imaging applications. It includes two new software tools, the Computer Vision and Image Processing Algorithm Test and Analysis Tool (CVIP-ATAT) and the CVIP Feature Extraction and Pattern Classification Tool (CVIP-FEPC). Divided into five major sections, this book provides the concepts and models required to analyze digital images and develop computer vision and human consumption applications as well as all the necessary information to use the CVIPtools environment for algorithm development, making it an ideal reference tool for this fast growing field.

Medical Optical Imaging and Virtual Microscopy Image Analysis

Medical Optical Imaging and Virtual Microscopy Image Analysis
Author: Yuankai Huo,Bryan A. Millis,Yuyin Zhou,Xiangxue Wang,Adam P. Harrison,Ziyue Xu
Publsiher: Springer Nature
Total Pages: 200
Release: 2022-09-16
Genre: Computers
ISBN: 9783031169618

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This book constitutes the refereed proceedings of the 1st International Workshop on Medical Optical Imaging and Virtual Microscopy Image Analysis, MOVI 2022, held in conjunction with the 25th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2022, in Singapore, Singapore, in September 2022. The 18 papers presented at MOVI 2022 were carefully reviewed and selected from 25 submissions. The objective of the MOVI workshop is to promote novel scalable and resource-efficient medical image analysis algorithms for high-dimensional image data analy-sis, from optical imaging to virtual microscopy.

Image Analysis in Histology

Image Analysis in Histology
Author: Richard Wootton,David Springall,Julia M. Polak
Publsiher: CUP Archive
Total Pages: 466
Release: 1995-05-11
Genre: Medical
ISBN: 0521434823

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This volume provides a timely and useful introduction to the theory and practical application of image analysis in histology. This powerful research technique can be used to detect not only stored products in a cell (immunocytochemistry) but the synthetic machinery and the genes that control it (in situ hybridisation), as well as the specific binding sites that act as receptors for a molecule following its release (in vitro autoradiography). The book provides a good introduction for beginners before looking in greater detail at more advanced material in selected areas. The volume highlights the importance of technique in gathering quantitative information. The book is divided into four sections: introductory material, image acquisition, image processing, and applications. The applications areas include quantitative immunochemistry, quantification of nerves and neurotransmitters and automated grain counting in in situ hybridisation histochemistry.

Content based Microscopic Image Analysis

Content based Microscopic Image Analysis
Author: Chen Li
Publsiher: Logos Verlag Berlin GmbH
Total Pages: 196
Release: 2016-05-15
Genre: Computers
ISBN: 9783832542535

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In this dissertation, novel Content-based Microscopic Image Analysis (CBMIA) methods, including Weakly Supervised Learning (WSL), are proposed to aid biological studies. In a CBMIA task, noisy image, image rotation, and object recognition problems need to be addressed. To this end, the first approach is a general supervised learning method, which consists of image segmentation, shape feature extraction, classification, and feature fusion, leading to a semi-automatic approach. In contrast, the second approach is a WSL method, which contains Sparse Coding (SC) feature extraction, classification, and feature fusion, leading to a full-automatic approach. In this WSL approach, the problems of noisy image and object recognition are jointly resolved by a region-based classifier, and the image rotation problem is figured out through SC features. To demonstrate the usefulness and potential of the proposed methods, experiments are implemented on di erent practical biological tasks, including environmental microorganism classification, stem cell analysis, and insect tracking.