Selected Papers From The Second Conference On Parallel Processing For Scientific Computing

Proceedings -- Parallel Computing.

The two volume set LNCS 7133 and LNCS 7134 constitutes the thoroughly refereed post-conference proceedings of the 10th International Conference on Applied Parallel and Scientific Computing, PARA 2010, held in Reykjavík, Iceland, in June 2010. These volumes contain three keynote lectures, 29 revised papers and 45 minisymposia presentations arranged on the following topics: cloud computing, HPC algorithms, HPC programming tools, HPC in meteorology, parallel numerical algorithms, parallel computing in physics, scientific computing tools, HPC software engineering, simulations of atomic scale systems, tools and environments for accelerator based computational biomedicine, GPU computing, high performance computing interval methods, real-time access and processing of large data sets, linear algebra algorithms and software for multicore and hybrid architectures in honor of Fred Gustavson on his 75th birthday, memory and multicore issues in scientific computing - theory and praxis, multicore algorithms and implementations for application problems, fast PDE solvers and a posteriori error estimates, and scalable tools for high performance computing.

Scientific computing has often been called the third approach to scientific discovery, emerging as a peer to experimentation and theory. Historically, the synergy between experimentation and theory has been well understood: experiments give insight into possible theories, theories inspire experiments, experiments reinforce or invalidate theories, and so on. As scientific computing has evolved to produce results that meet or exceed the quality of experimental and theoretical results, it has become indispensable.Parallel processing has been an enabling technology in scientific computing for more than 20 years. This book is the first in-depth discussion of parallel computing in 10 years; it reflects the mix of topics that mathematicians, computer scientists, and computational scientists focus on to make parallel processing effective for scientific problems. Presently, the impact of parallel processing on scientific computing varies greatly across disciplines, but it plays a vital role in most problem domains and is absolutely essential in many of them. Parallel Processing for Scientific Computing is divided into four parts: The first concerns performance modeling, analysis, and optimization; the second focuses on parallel algorithms and software for an array of problems common to many modeling and simulation applications; the third emphasizes tools and environments that can ease and enhance the process of application development; and the fourth provides a sampling of applications that require parallel computing for scaling to solve larger and realistic models that can advance science and engineering. This edited volume serves as an up-to-date reference for researchers and application developers on the state of the art in scientific computing. It also serves as an excellent overview and introduction, especially for graduate and senior-level undergraduate students interested in computational modeling and simulation and related computer science and applied mathematics aspects.Contents List of Figures; List of Tables; Preface; Chapter 1: Frontiers of Scientific Computing: An Overview; Part I: Performance Modeling, Analysis and Optimization. Chapter 2: Performance Analysis: From Art to Science; Chapter 3: Approaches to Architecture-Aware Parallel Scientific Computation; Chapter 4: Achieving High Performance on the BlueGene/L Supercomputer; Chapter 5: Performance Evaluation and Modeling of Ultra-Scale Systems; Part II: Parallel Algorithms and Enabling Technologies. Chapter 6: Partitioning and Load Balancing; Chapter 7: Combinatorial Parallel and Scientific Computing; Chapter 8: Parallel Adaptive Mesh Refinement; Chapter 9: Parallel Sparse Solvers, Preconditioners, and Their Applications; Chapter 10: A Survey of Parallelization Techniques for Multigrid Solvers; Chapter 11: Fault Tolerance in Large-Scale Scientific Computing; Part III: Tools and Frameworks for Parallel Applications. Chapter 12: Parallel Tools and Environments: A Survey; Chapter 13: Parallel Linear Algebra Software; Chapter 14: High-Performance Component Software Systems; Chapter 15: Integrating Component-Based Scientific Computing Software; Part IV: Applications of Parallel Computing. Chapter 16: Parallel Algorithms for PDE-Constrained Optimization; Chapter 17: Massively Parallel Mixed-Integer Programming; Chapter 18: Parallel Methods and Software for Multicomponent Simulations; Chapter 19: Parallel Computational Biology; Chapter 20: Opportunities and Challenges for Parallel Computing in Science and Engineering; Index.

This two-volume-set (LNCS 8384 and 8385) constitutes the refereed proceedings of the 10th International Conference of Parallel Processing and Applied Mathematics, PPAM 2013, held in Warsaw, Poland, in September 2013. The 143 revised full papers presented in both volumes were carefully reviewed and selected from numerous submissions. The papers cover important fields of parallel/distributed/cloud computing and applied mathematics, such as numerical algorithms and parallel scientific computing; parallel non-numerical algorithms; tools and environments for parallel/distributed/cloud computing; applications of parallel computing; applied mathematics, evolutionary computing and metaheuristics.

This two-volume-set (LNCS 8384 and 8385) constitutes the refereed proceedings of the 10th International Conference of Parallel Processing and Applied Mathematics, PPAM 2013, held in Warsaw, Poland, in September 2013. The 143 revised full papers presented in both volumes were carefully reviewed and selected from numerous submissions. The papers cover important fields of parallel/distributed/cloud computing and applied mathematics, such as numerical algorithms and parallel scientific computing; parallel non-numerical algorithms; tools and environments for parallel/distributed/cloud computing; applications of parallel computing; applied mathematics, evolutionary computing and metaheuristics.

From the preface: Fluid dynamics is an excellent example of how recent advances in computational tools and techniques permit the rapid advance of basic and applied science. The development of computational fluid dynamics (CFD) has opened new areas of research and has significantly supplemented information available from experimental measurements. Scientific computing is directly responsible for such recent developments as the secondary instability theory of transition to turbulence, dynamical systems analyses of routes to chaos, ideas on the geometry of turbulence, direct simulations of turbulence, three-dimensional full-aircraft flow analyses, and so on. We believe that CFD has already achieved a status in the tool-kit of fluid mechanicians equal to that of the classical scientific techniques of mathematical analysis and laboratory experiment.